CDS
| Accession Number | TCMCG006C107950 |
| gbkey | CDS |
| Protein Id | XP_013658455.1 |
| Location | complement(join(16197588..16197695,16197770..16198019,16198103..16198266,16198338..16198500,16198588..16199453)) |
| Gene | LOC106363216 |
| GeneID | 106363216 |
| Organism | Brassica napus |
Protein
| Length | 516aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013803001.2 |
| Definition | pumilio homolog 15-like [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts |
| KEGG_TC | 1.B.33 |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko02000 [VIEW IN KEGG] ko03029 [VIEW IN KEGG] |
| KEGG_ko |
ko:K07277
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGACGACTAACCAAAACGGAAGAGATGGAGACGAGAATCCGGAGGAAGCCTTGCCGCCGTCTCCGTCTCAACAGCTTCTACGTGAAAGACTCAAAGCTTACGAGAATATGTATGGCTCCTTGGATGATCATTACTCACGTAGAACCGGATCTTCACAGTTTGCTCCTTTGTCAGATTTGCGAGCCCTTGAATCTGACTTTAGAAGATTGGGTGTCTATGATTCAAACCCTCGCCAACAGCCGCTACGTGATCAACGTGGAAGCAATCAATTTCCTTTGAATGGTGGAGATCGAGGTATCAATGAATACTTTAACCCTTCGTATTTTCACTCTCAAACTGAACAAGCACAGATTAATCTGGAGAGGATGTGGTTTAGGAAGGATAATCTTGTTAATGGGTATCATGCTTATAAGTCATCTAATTATGGTTCTTATGGGCGTGGCAATAGTGGTATGTCGTTTCGTTCTCCGTACTTTGACCACTGTGAGGTTCCTTTCCCTCAAAGTAATAATCATAATTCTGGTAATCAAAGCCGTTGGAGTTATTCACACGGTTATGTGCCTCGAACCCATGATCTATTCAATATGAATAACTCTAGGGCTACGGATAACACACTGTCTCGTGCTAAAAACCGTGTGGATTCTGTCGAGTTGCAAAACTTGATTGCGGAAGGTTCAAGAGACACTATTGATCAGATATTTGATGAGCTGATATCACATGTTTGTGAGCTGATGACTGATCCTTTTGGCCATCAAGTATTTCAAAAGCTCATGGAGAAATGTACAAATGAACAAATCACTCGGGTTTTGGAAATTTTCATCCAACAACCTAATCAGTTTGTGAGAATTTGTGGCGATATGCATGGAACGCGTGCAATACAAGATTTGATCCGATGTCTTAGTTCAGAAGAGCAAATATCCCACTTCATGGTAACTATATGCCATGCTGCATTACTTCTGAGCAAGAGCACTAATGCAAATGATGTGATTATGTTTTGCTTCAGCCATTTTTCTCCTTCACAAACAAATGGACTTCTTCAAATGATTGTTCAAAACTGTTATCAAATTGCAATTGATCATTATGGTTCTTGTCTACTTCAACAATGCATTGGAAAATCCCGTCAAGAAATAAGGGAGCCTTTGATTAGAGAGATAATCGCTAATGCTATGAATCTATGTGTGAATCGCTATGGAAACTATGTGGTCCAGTATGTGTTGGAATTGGAAAATTTTCAAGTGGCAGCAGCTCTGTCAAGATATCTCAGTGGGAATTACGTGCAACTCTCTTGTGACAAGTTTGGAAGTCATGCGGTGCAAAAATGTTTAGAAAGTAGACAATTCAACTCGAGGATGATCATCAACGAGCTGCTTACTGACATTGATTCACTTCTTGTAAATCCTTTCGGAAACTATGTAATTCAGACTGCATGGGTTGTATCTCAGAATGATATGCGAAGTGAATTGTTGTACCATATCAACAGGAATCATCCGTTGTTGAGGTGCAATAGATACGGGAGAAAAGTACTTGAAAAACTTAATCTTTGGACATAA |
| Protein: MTTNQNGRDGDENPEEALPPSPSQQLLRERLKAYENMYGSLDDHYSRRTGSSQFAPLSDLRALESDFRRLGVYDSNPRQQPLRDQRGSNQFPLNGGDRGINEYFNPSYFHSQTEQAQINLERMWFRKDNLVNGYHAYKSSNYGSYGRGNSGMSFRSPYFDHCEVPFPQSNNHNSGNQSRWSYSHGYVPRTHDLFNMNNSRATDNTLSRAKNRVDSVELQNLIAEGSRDTIDQIFDELISHVCELMTDPFGHQVFQKLMEKCTNEQITRVLEIFIQQPNQFVRICGDMHGTRAIQDLIRCLSSEEQISHFMVTICHAALLLSKSTNANDVIMFCFSHFSPSQTNGLLQMIVQNCYQIAIDHYGSCLLQQCIGKSRQEIREPLIREIIANAMNLCVNRYGNYVVQYVLELENFQVAAALSRYLSGNYVQLSCDKFGSHAVQKCLESRQFNSRMIINELLTDIDSLLVNPFGNYVIQTAWVVSQNDMRSELLYHINRNHPLLRCNRYGRKVLEKLNLWT |